mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h0s5f_v2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:05:35,400 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:05:36,182 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:05:36,347 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:05:57,614 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:05:57,800 - cnv_pipe.batch.run_model - INFO - Processing cluster 60 with 199 probes
2026-06-02 19:05:58,169 - cnv_pipe.batch.run_model.cluster60 - INFO - Child process started for cluster 60 with 199 probes
2026-06-02 19:09:22,935 - cnv_pipe.batch.run_model.cluster60 - INFO - Child process finished cluster 60. Wrote cluster_60_samples.csv and cluster_60_params.csv
2026-06-02 19:09:22,937 - cnv_pipe.batch.run_model - INFO - Cluster 60 finished in 205.14 seconds. Status: SUCCESS