mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-23_mnl59 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:53,118 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:54,065 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:54,251 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:20,103 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:20,333 - cnv_pipe.batch.run_model - INFO - Processing cluster 993 with 163 probes
2026-06-02 19:09:20,744 - cnv_pipe.batch.run_model.cluster993 - INFO - Child process started for cluster 993 with 163 probes
2026-06-02 19:12:35,832 - cnv_pipe.batch.run_model.cluster993 - INFO - Child process finished cluster 993. Wrote cluster_993_samples.csv and cluster_993_params.csv
2026-06-02 19:12:35,834 - cnv_pipe.batch.run_model - INFO - Cluster 993 finished in 195.50 seconds. Status: SUCCESS