File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/636f18d68dab6567a5200c731a0b5b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8vff23x7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:06,781 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:07,680 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:07,857 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:32,218 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:32,304 - cnv_pipe.batch.run_model - INFO - Processing cluster 754 with 183 probes
2026-06-02 19:08:32,855 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process started for cluster 754 with 183 probes
2026-06-02 19:11:55,489 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process finished cluster 754. Wrote cluster_754_samples.csv and cluster_754_params.csv
2026-06-02 19:11:55,492 - cnv_pipe.batch.run_model - INFO - Cluster 754 finished in 203.19 seconds. Status: SUCCESS