File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/46de74a716a5f4a7001b57a7f094eb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s33aiz84 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:26,302 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:27,156 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:27,327 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:50,838 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:51,047 - cnv_pipe.batch.run_model - INFO - Processing cluster 845 with 177 probes
2026-06-02 19:08:51,459 - cnv_pipe.batch.run_model.cluster845 - INFO - Child process started for cluster 845 with 177 probes
2026-06-02 19:12:17,303 - cnv_pipe.batch.run_model.cluster845 - INFO - Child process finished cluster 845. Wrote cluster_845_samples.csv and cluster_845_params.csv
2026-06-02 19:12:17,305 - cnv_pipe.batch.run_model - INFO - Cluster 845 finished in 206.26 seconds. Status: SUCCESS