File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/fe3f7b8090866e0d0c978615a3c501/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yl5wccic because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:09:05,225 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:09:06,176 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:09:06,363 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:30,033 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:30,233 - cnv_pipe.batch.run_model - INFO - Processing cluster 1051 with 192 probes
2026-06-02 19:09:30,662 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process started for cluster 1051 with 192 probes
2026-06-02 19:13:00,938 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process finished cluster 1051. Wrote cluster_1051_samples.csv and cluster_1051_params.csv
2026-06-02 19:13:00,941 - cnv_pipe.batch.run_model - INFO - Cluster 1051 finished in 210.71 seconds. Status: SUCCESS