File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/bebe8d43efb11b8c7b13850c4009c3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uhgknk6d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:02,886 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:03,721 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:03,890 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:27,780 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:28,004 - cnv_pipe.batch.run_model - INFO - Processing cluster 733 with 192 probes
2026-06-02 19:08:28,437 - cnv_pipe.batch.run_model.cluster733 - INFO - Child process started for cluster 733 with 192 probes
2026-06-02 19:11:59,980 - cnv_pipe.batch.run_model.cluster733 - INFO - Child process finished cluster 733. Wrote cluster_733_samples.csv and cluster_733_params.csv
2026-06-02 19:11:59,982 - cnv_pipe.batch.run_model - INFO - Cluster 733 finished in 211.98 seconds. Status: SUCCESS