File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/f4e7de9d2fc9a4fe3f55b6cd40e5fb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f2ndz4bn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:07:49,341 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:07:50,160 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:07:50,333 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:14,630 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:14,876 - cnv_pipe.batch.run_model - INFO - Processing cluster 666 with 196 probes
2026-06-02 19:08:15,287 - cnv_pipe.batch.run_model.cluster666 - INFO - Child process started for cluster 666 with 196 probes
2026-06-02 19:11:54,468 - cnv_pipe.batch.run_model.cluster666 - INFO - Child process finished cluster 666. Wrote cluster_666_samples.csv and cluster_666_params.csv
2026-06-02 19:11:54,471 - cnv_pipe.batch.run_model - INFO - Cluster 666 finished in 219.59 seconds. Status: SUCCESS