File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/cb8a892d8896e2fc7a676a4602507e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-leiibsuz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:24,486 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:25,339 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:25,518 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:49,270 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:49,488 - cnv_pipe.batch.run_model - INFO - Processing cluster 838 with 185 probes
2026-06-02 19:08:49,905 - cnv_pipe.batch.run_model.cluster838 - INFO - Child process started for cluster 838 with 185 probes
2026-06-02 19:12:12,111 - cnv_pipe.batch.run_model.cluster838 - INFO - Child process finished cluster 838. Wrote cluster_838_samples.csv and cluster_838_params.csv
2026-06-02 19:12:12,114 - cnv_pipe.batch.run_model - INFO - Cluster 838 finished in 202.63 seconds. Status: SUCCESS