File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/dfc0e4df67f184daaee1c4870c8203/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7k5yvoj8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:10,737 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:11,576 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:11,744 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:35,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:35,555 - cnv_pipe.batch.run_model - INFO - Processing cluster 773 with 154 probes
2026-06-02 19:08:35,976 - cnv_pipe.batch.run_model.cluster773 - INFO - Child process started for cluster 773 with 154 probes
2026-06-02 19:11:32,094 - cnv_pipe.batch.run_model.cluster773 - INFO - Child process finished cluster 773. Wrote cluster_773_samples.csv and cluster_773_params.csv
2026-06-02 19:11:32,096 - cnv_pipe.batch.run_model - INFO - Cluster 773 finished in 176.54 seconds. Status: SUCCESS