File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/a4b987aa60f326e8a0fc2f191b4738/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rlge8eaq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:55,616 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:56,458 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:56,627 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:09:20,339 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:09:20,419 - cnv_pipe.batch.run_model - INFO - Processing cluster 1011 with 191 probes
2026-06-02 19:09:20,949 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process started for cluster 1011 with 191 probes
2026-06-02 19:12:55,978 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process finished cluster 1011. Wrote cluster_1011_samples.csv and cluster_1011_params.csv
2026-06-02 19:12:55,981 - cnv_pipe.batch.run_model - INFO - Cluster 1011 finished in 215.56 seconds. Status: SUCCESS