mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kyf946vq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:05:44,911 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:05:45,680 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:05:45,844 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:06:07,326 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:06:07,513 - cnv_pipe.batch.run_model - INFO - Processing cluster 96 with 194 probes
2026-06-02 19:06:07,878 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process started for cluster 96 with 194 probes
2026-06-02 19:09:22,270 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process finished cluster 96. Wrote cluster_96_samples.csv and cluster_96_params.csv
2026-06-02 19:09:22,272 - cnv_pipe.batch.run_model - INFO - Cluster 96 finished in 194.76 seconds. Status: SUCCESS