File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/4af8e8cea4b3d7d977441116743859/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xyy7qx4q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:08:19,147 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:08:19,980 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:08:20,153 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:08:42,022 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:08:42,101 - cnv_pipe.batch.run_model - INFO - Processing cluster 813 with 184 probes
2026-06-02 19:08:42,478 - cnv_pipe.batch.run_model.cluster813 - INFO - Child process started for cluster 813 with 184 probes
2026-06-02 19:11:59,608 - cnv_pipe.batch.run_model.cluster813 - INFO - Child process finished cluster 813. Wrote cluster_813_samples.csv and cluster_813_params.csv
2026-06-02 19:11:59,610 - cnv_pipe.batch.run_model - INFO - Cluster 813 finished in 197.51 seconds. Status: SUCCESS