mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lu_aaa7o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 19:05:34,596 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 19:05:35,373 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 19:05:35,540 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 19:05:56,872 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-02 19:05:57,049 - cnv_pipe.batch.run_model - INFO - Processing cluster 56 with 189 probes
2026-06-02 19:05:57,419 - cnv_pipe.batch.run_model.cluster56 - INFO - Child process started for cluster 56 with 189 probes
2026-06-02 19:09:05,985 - cnv_pipe.batch.run_model.cluster56 - INFO - Child process finished cluster 56. Wrote cluster_56_samples.csv and cluster_56_params.csv
2026-06-02 19:09:05,987 - cnv_pipe.batch.run_model - INFO - Cluster 56 finished in 188.94 seconds. Status: SUCCESS