File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/b2ea22a7b6e04251e48eb4b0cbd834/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ubtzf795 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:46:43,832 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:46:44,640 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:46:44,809 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:06,983 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:07,067 - cnv_pipe.batch.run_model - INFO - Processing cluster 748 with 191 probes
2026-06-02 18:47:07,484 - cnv_pipe.batch.run_model.cluster748 - INFO - Child process started for cluster 748 with 191 probes
2026-06-02 18:50:33,943 - cnv_pipe.batch.run_model.cluster748 - INFO - Child process finished cluster 748. Wrote cluster_748_samples.csv and cluster_748_params.csv
2026-06-02 18:50:33,946 - cnv_pipe.batch.run_model - INFO - Cluster 748 finished in 206.88 seconds. Status: SUCCESS