File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/c5bf3865ed6fc8b9b39e41e7cfac4a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-b4s531v_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:55,172 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:56,034 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:56,212 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:48:18,719 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:48:18,931 - cnv_pipe.batch.run_model - INFO - Processing cluster 1165 with 191 probes
2026-06-02 18:48:19,346 - cnv_pipe.batch.run_model.cluster1165 - INFO - Child process started for cluster 1165 with 191 probes
2026-06-02 18:51:42,297 - cnv_pipe.batch.run_model.cluster1165 - INFO - Child process finished cluster 1165. Wrote cluster_1165_samples.csv and cluster_1165_params.csv
2026-06-02 18:51:42,299 - cnv_pipe.batch.run_model - INFO - Cluster 1165 finished in 203.37 seconds. Status: SUCCESS