File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/40694598c741b69d0282d72e9ac384/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gpvdbz_d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:08,385 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:09,158 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:09,321 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:30,529 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:30,676 - cnv_pipe.batch.run_model - INFO - Processing cluster 924 with 179 probes
2026-06-02 18:47:31,041 - cnv_pipe.batch.run_model.cluster924 - INFO - Child process started for cluster 924 with 179 probes
2026-06-02 18:50:37,490 - cnv_pipe.batch.run_model.cluster924 - INFO - Child process finished cluster 924. Wrote cluster_924_samples.csv and cluster_924_params.csv
2026-06-02 18:50:37,491 - cnv_pipe.batch.run_model - INFO - Cluster 924 finished in 186.81 seconds. Status: SUCCESS