File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/36f054611867bce18089350f57842c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fe_z8r9j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:20,008 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:20,865 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:21,034 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:43,186 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:43,415 - cnv_pipe.batch.run_model - INFO - Processing cluster 978 with 196 probes
2026-06-02 18:47:43,816 - cnv_pipe.batch.run_model.cluster978 - INFO - Child process started for cluster 978 with 196 probes
2026-06-02 18:51:11,245 - cnv_pipe.batch.run_model.cluster978 - INFO - Child process finished cluster 978. Wrote cluster_978_samples.csv and cluster_978_params.csv
2026-06-02 18:51:11,248 - cnv_pipe.batch.run_model - INFO - Cluster 978 finished in 207.83 seconds. Status: SUCCESS