mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fdkh8mq7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:44:29,198 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:44:30,012 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:44:30,184 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:44:51,922 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:44:52,140 - cnv_pipe.batch.run_model - INFO - Processing cluster 77 with 200 probes
2026-06-02 18:44:52,529 - cnv_pipe.batch.run_model.cluster77 - INFO - Child process started for cluster 77 with 200 probes
2026-06-02 18:48:15,479 - cnv_pipe.batch.run_model.cluster77 - INFO - Child process finished cluster 77. Wrote cluster_77_samples.csv and cluster_77_params.csv
2026-06-02 18:48:15,481 - cnv_pipe.batch.run_model - INFO - Cluster 77 finished in 203.34 seconds. Status: SUCCESS