File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/e51e546c4b2a70a4f8128187de7619/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fc9tze8w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:11,133 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:11,982 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:12,158 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:34,179 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:34,367 - cnv_pipe.batch.run_model - INFO - Processing cluster 936 with 176 probes
2026-06-02 18:47:34,778 - cnv_pipe.batch.run_model.cluster936 - INFO - Child process started for cluster 936 with 176 probes
2026-06-02 18:50:39,980 - cnv_pipe.batch.run_model.cluster936 - INFO - Child process finished cluster 936. Wrote cluster_936_samples.csv and cluster_936_params.csv
2026-06-02 18:50:39,983 - cnv_pipe.batch.run_model - INFO - Cluster 936 finished in 185.62 seconds. Status: SUCCESS