File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/1e1481a726bb096da47401d6b07201/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yasz2jd_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:14,533 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:15,390 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:15,573 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:38,272 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:38,375 - cnv_pipe.batch.run_model - INFO - Processing cluster 954 with 183 probes
2026-06-02 18:47:38,954 - cnv_pipe.batch.run_model.cluster954 - INFO - Child process started for cluster 954 with 183 probes
2026-06-02 18:51:08,723 - cnv_pipe.batch.run_model.cluster954 - INFO - Child process finished cluster 954. Wrote cluster_954_samples.csv and cluster_954_params.csv
2026-06-02 18:51:08,726 - cnv_pipe.batch.run_model - INFO - Cluster 954 finished in 210.35 seconds. Status: SUCCESS