File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/4860af7f4b49322ca560671a6027cf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5b9b3s9v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:44:31,761 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:44:32,542 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:44:32,716 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:44:53,153 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:44:53,365 - cnv_pipe.batch.run_model - INFO - Processing cluster 95 with 190 probes
2026-06-02 18:44:53,744 - cnv_pipe.batch.run_model.cluster95 - INFO - Child process started for cluster 95 with 190 probes
2026-06-02 18:48:15,180 - cnv_pipe.batch.run_model.cluster95 - INFO - Child process finished cluster 95. Wrote cluster_95_samples.csv and cluster_95_params.csv
2026-06-02 18:48:15,183 - cnv_pipe.batch.run_model - INFO - Cluster 95 finished in 201.82 seconds. Status: SUCCESS