File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/b3c11f696db84b7809c419db29e6f4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d9v98pti because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:39,180 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:40,009 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:40,195 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:48:03,847 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:48:03,938 - cnv_pipe.batch.run_model - INFO - Processing cluster 1082 with 195 probes
2026-06-02 18:48:04,560 - cnv_pipe.batch.run_model.cluster1082 - INFO - Child process started for cluster 1082 with 195 probes
2026-06-02 18:52:04,297 - cnv_pipe.batch.run_model.cluster1082 - INFO - Child process finished cluster 1082. Wrote cluster_1082_samples.csv and cluster_1082_params.csv
2026-06-02 18:52:04,299 - cnv_pipe.batch.run_model - INFO - Cluster 1082 finished in 240.36 seconds. Status: SUCCESS