File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/34914f4174d0ec3905a631e86cae1e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l56drs8n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:59,502 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:48:00,371 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:48:00,546 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:48:22,667 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:48:22,763 - cnv_pipe.batch.run_model - INFO - Processing cluster 1184 with 184 probes
2026-06-02 18:48:23,318 - cnv_pipe.batch.run_model.cluster1184 - INFO - Child process started for cluster 1184 with 184 probes
2026-06-02 18:51:40,271 - cnv_pipe.batch.run_model.cluster1184 - INFO - Child process finished cluster 1184. Wrote cluster_1184_samples.csv and cluster_1184_params.csv
2026-06-02 18:51:40,272 - cnv_pipe.batch.run_model - INFO - Cluster 1184 finished in 197.51 seconds. Status: SUCCESS