File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/0c7f03ffb3d3054ebd5dc7bed5e9a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_0mtuezf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:46:57,344 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:46:58,137 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:46:58,303 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:19,182 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:19,256 - cnv_pipe.batch.run_model - INFO - Processing cluster 861 with 197 probes
2026-06-02 18:47:19,623 - cnv_pipe.batch.run_model.cluster861 - INFO - Child process started for cluster 861 with 197 probes
2026-06-02 18:50:46,308 - cnv_pipe.batch.run_model.cluster861 - INFO - Child process finished cluster 861. Wrote cluster_861_samples.csv and cluster_861_params.csv
2026-06-02 18:50:46,311 - cnv_pipe.batch.run_model - INFO - Cluster 861 finished in 207.05 seconds. Status: SUCCESS