File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/9f168f1edfa283bba897a3c9d84d1a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6d91shiz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:47:38,018 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:39,035 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:39,243 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:48:03,315 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:48:03,546 - cnv_pipe.batch.run_model - INFO - Processing cluster 1067 with 189 probes
2026-06-02 18:48:04,027 - cnv_pipe.batch.run_model.cluster1067 - INFO - Child process started for cluster 1067 with 189 probes
2026-06-02 18:52:08,682 - cnv_pipe.batch.run_model.cluster1067 - INFO - Child process finished cluster 1067. Wrote cluster_1067_samples.csv and cluster_1067_params.csv
2026-06-02 18:52:08,686 - cnv_pipe.batch.run_model - INFO - Cluster 1067 finished in 245.14 seconds. Status: SUCCESS