File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/d29ac5958d82d6760132622b2caca9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ya4d5psk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:46:59,327 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:47:00,102 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:47:00,269 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:47:21,067 - cnv_pipe.batch.run_model - INFO - Loaded data with 96 samples
2026-06-02 18:47:21,233 - cnv_pipe.batch.run_model - INFO - Processing cluster 873 with 188 probes
2026-06-02 18:47:21,613 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process started for cluster 873 with 188 probes
2026-06-02 18:50:48,989 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process finished cluster 873. Wrote cluster_873_samples.csv and cluster_873_params.csv
2026-06-02 18:50:48,992 - cnv_pipe.batch.run_model - INFO - Cluster 873 finished in 207.76 seconds. Status: SUCCESS