File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/329e7313c267812e8963f8998ff89a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dok2uetk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:39:29,089 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:29,963 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:30,153 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:46,368 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:46,575 - cnv_pipe.batch.run_model - INFO - Processing cluster 1269 with 194 probes
2026-06-02 18:39:46,954 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process started for cluster 1269 with 194 probes
2026-06-02 18:43:15,976 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process finished cluster 1269. Wrote cluster_1269_samples.csv and cluster_1269_params.csv
2026-06-02 18:43:15,980 - cnv_pipe.batch.run_model - INFO - Cluster 1269 finished in 209.40 seconds. Status: SUCCESS