File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/6d4850e75a938f9b1d0e45ac488cb4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-evxk977k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:53,382 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:54,205 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:54,381 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:09,724 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:10,000 - cnv_pipe.batch.run_model - INFO - Processing cluster 807 with 167 probes
2026-06-02 18:38:10,445 - cnv_pipe.batch.run_model.cluster807 - INFO - Child process started for cluster 807 with 167 probes
2026-06-02 18:41:21,534 - cnv_pipe.batch.run_model.cluster807 - INFO - Child process finished cluster 807. Wrote cluster_807_samples.csv and cluster_807_params.csv
2026-06-02 18:41:21,536 - cnv_pipe.batch.run_model - INFO - Cluster 807 finished in 191.54 seconds. Status: SUCCESS