mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xaog5eps because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:39:04,457 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:05,244 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:05,415 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:19,804 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:20,026 - cnv_pipe.batch.run_model - INFO - Processing cluster 10 with 198 probes
2026-06-02 18:39:20,436 - cnv_pipe.batch.run_model.cluster10 - INFO - Child process started for cluster 10 with 198 probes
2026-06-02 18:42:46,426 - cnv_pipe.batch.run_model.cluster10 - INFO - Child process finished cluster 10. Wrote cluster_10_samples.csv and cluster_10_params.csv
2026-06-02 18:42:46,429 - cnv_pipe.batch.run_model - INFO - Cluster 10 finished in 206.40 seconds. Status: SUCCESS