File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/4947fda29b97b44c95d50cacd2638f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ifzxs4zh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:11,324 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:12,172 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:12,352 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:27,491 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:27,579 - cnv_pipe.batch.run_model - INFO - Processing cluster 920 with 172 probes
2026-06-02 18:38:28,124 - cnv_pipe.batch.run_model.cluster920 - INFO - Child process started for cluster 920 with 172 probes
2026-06-02 18:41:42,832 - cnv_pipe.batch.run_model.cluster920 - INFO - Child process finished cluster 920. Wrote cluster_920_samples.csv and cluster_920_params.csv
2026-06-02 18:41:42,835 - cnv_pipe.batch.run_model - INFO - Cluster 920 finished in 195.26 seconds. Status: SUCCESS