File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/2330a8cefc2fabc49f1b2f97f7f134/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1pujoydb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:48,719 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:49,573 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:49,783 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:04,376 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:04,620 - cnv_pipe.batch.run_model - INFO - Processing cluster 830 with 164 probes
2026-06-02 18:38:05,011 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process started for cluster 830 with 164 probes
2026-06-02 18:41:10,906 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process finished cluster 830. Wrote cluster_830_samples.csv and cluster_830_params.csv
2026-06-02 18:41:10,909 - cnv_pipe.batch.run_model - INFO - Cluster 830 finished in 186.29 seconds. Status: SUCCESS