mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kt5_arme because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:53,896 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:54,691 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:54,878 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:10,032 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:10,110 - cnv_pipe.batch.run_model - INFO - Processing cluster 1116 with 109 probes
2026-06-02 18:39:10,490 - cnv_pipe.batch.run_model.cluster1116 - INFO - Child process started for cluster 1116 with 109 probes
2026-06-02 18:41:09,733 - cnv_pipe.batch.run_model.cluster1116 - INFO - Child process finished cluster 1116. Wrote cluster_1116_samples.csv and cluster_1116_params.csv
2026-06-02 18:41:09,734 - cnv_pipe.batch.run_model - INFO - Cluster 1116 finished in 119.62 seconds. Status: SUCCESS