File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/b3586f74fe0a51ffca8112251e3fd5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s_vh53ds because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:02,778 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:03,583 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:03,769 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:18,447 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:18,526 - cnv_pipe.batch.run_model - INFO - Processing cluster 597 with 192 probes
2026-06-02 18:37:19,032 - cnv_pipe.batch.run_model.cluster597 - INFO - Child process started for cluster 597 with 192 probes
2026-06-02 18:40:41,475 - cnv_pipe.batch.run_model.cluster597 - INFO - Child process finished cluster 597. Wrote cluster_597_samples.csv and cluster_597_params.csv
2026-06-02 18:40:41,478 - cnv_pipe.batch.run_model - INFO - Cluster 597 finished in 202.95 seconds. Status: SUCCESS