mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cocygfbh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:27,946 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:28,746 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:28,916 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:44,778 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:44,861 - cnv_pipe.batch.run_model - INFO - Processing cluster 548 with 197 probes
2026-06-02 18:37:45,241 - cnv_pipe.batch.run_model.cluster548 - INFO - Child process started for cluster 548 with 197 probes
2026-06-02 18:41:14,695 - cnv_pipe.batch.run_model.cluster548 - INFO - Child process finished cluster 548. Wrote cluster_548_samples.csv and cluster_548_params.csv
2026-06-02 18:41:14,698 - cnv_pipe.batch.run_model - INFO - Cluster 548 finished in 209.84 seconds. Status: SUCCESS