mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tfttp0os because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:32,171 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:32,976 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:33,165 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:48,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:49,047 - cnv_pipe.batch.run_model - INFO - Processing cluster 535 with 199 probes
2026-06-02 18:37:49,535 - cnv_pipe.batch.run_model.cluster535 - INFO - Child process started for cluster 535 with 199 probes
2026-06-02 18:41:19,976 - cnv_pipe.batch.run_model.cluster535 - INFO - Child process finished cluster 535. Wrote cluster_535_samples.csv and cluster_535_params.csv
2026-06-02 18:41:19,978 - cnv_pipe.batch.run_model - INFO - Cluster 535 finished in 210.93 seconds. Status: SUCCESS