File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/26dfcbe557565d30f1a800cc793487/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0m6naha4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:39:29,071 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:29,871 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:30,041 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:45,974 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:46,227 - cnv_pipe.batch.run_model - INFO - Processing cluster 1271 with 200 probes
2026-06-02 18:39:46,607 - cnv_pipe.batch.run_model.cluster1271 - INFO - Child process started for cluster 1271 with 200 probes
2026-06-02 18:43:26,082 - cnv_pipe.batch.run_model.cluster1271 - INFO - Child process finished cluster 1271. Wrote cluster_1271_samples.csv and cluster_1271_params.csv
2026-06-02 18:43:26,084 - cnv_pipe.batch.run_model - INFO - Cluster 1271 finished in 219.86 seconds. Status: SUCCESS