File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/b12ff9d8847a0c59b5f30dafe3fa38/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xssdbsdi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:45,114 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:45,988 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:46,153 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:01,490 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:01,721 - cnv_pipe.batch.run_model - INFO - Processing cluster 857 with 170 probes
2026-06-02 18:38:02,153 - cnv_pipe.batch.run_model.cluster857 - INFO - Child process started for cluster 857 with 170 probes
2026-06-02 18:41:11,545 - cnv_pipe.batch.run_model.cluster857 - INFO - Child process finished cluster 857. Wrote cluster_857_samples.csv and cluster_857_params.csv
2026-06-02 18:41:11,548 - cnv_pipe.batch.run_model - INFO - Cluster 857 finished in 189.83 seconds. Status: SUCCESS