mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1pxvpr35 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:36,196 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:37,024 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:37,205 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:52,410 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:52,491 - cnv_pipe.batch.run_model - INFO - Processing cluster 627 with 128 probes
2026-06-02 18:37:52,881 - cnv_pipe.batch.run_model.cluster627 - INFO - Child process started for cluster 627 with 128 probes
2026-06-02 18:40:13,255 - cnv_pipe.batch.run_model.cluster627 - INFO - Child process finished cluster 627. Wrote cluster_627_samples.csv and cluster_627_params.csv
2026-06-02 18:40:13,258 - cnv_pipe.batch.run_model - INFO - Cluster 627 finished in 140.77 seconds. Status: SUCCESS