File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/133fea3e01af88a145a94c3ed9e4d1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fh4u4v38 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:58,389 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:59,178 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:59,350 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:14,246 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:14,466 - cnv_pipe.batch.run_model - INFO - Processing cluster 735 with 198 probes
2026-06-02 18:39:14,838 - cnv_pipe.batch.run_model.cluster735 - INFO - Child process started for cluster 735 with 198 probes
2026-06-02 18:42:50,994 - cnv_pipe.batch.run_model.cluster735 - INFO - Child process finished cluster 735. Wrote cluster_735_samples.csv and cluster_735_params.csv
2026-06-02 18:42:50,996 - cnv_pipe.batch.run_model - INFO - Cluster 735 finished in 216.53 seconds. Status: SUCCESS