mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4slm5pxz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:59,603 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:00,407 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:00,598 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:16,524 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:16,731 - cnv_pipe.batch.run_model - INFO - Processing cluster 998 with 199 probes
2026-06-02 18:39:17,111 - cnv_pipe.batch.run_model.cluster998 - INFO - Child process started for cluster 998 with 199 probes
2026-06-02 18:43:00,643 - cnv_pipe.batch.run_model.cluster998 - INFO - Child process finished cluster 998. Wrote cluster_998_samples.csv and cluster_998_params.csv
2026-06-02 18:43:00,645 - cnv_pipe.batch.run_model - INFO - Cluster 998 finished in 223.91 seconds. Status: SUCCESS