mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-328klt1i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:43,494 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:44,316 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:44,496 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:59,645 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:59,886 - cnv_pipe.batch.run_model - INFO - Processing cluster 96 with 194 probes
2026-06-02 18:38:00,328 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process started for cluster 96 with 194 probes
2026-06-02 18:41:23,424 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process finished cluster 96. Wrote cluster_96_samples.csv and cluster_96_params.csv
2026-06-02 18:41:23,428 - cnv_pipe.batch.run_model - INFO - Cluster 96 finished in 203.54 seconds. Status: SUCCESS