File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/0863a0325e2ac917e9b9080e36f32d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k8l2ovld because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:59,300 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:00,112 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:00,287 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:16,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:16,529 - cnv_pipe.batch.run_model - INFO - Processing cluster 883 with 193 probes
2026-06-02 18:39:16,907 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process started for cluster 883 with 193 probes
2026-06-02 18:42:53,632 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process finished cluster 883. Wrote cluster_883_samples.csv and cluster_883_params.csv
2026-06-02 18:42:53,634 - cnv_pipe.batch.run_model - INFO - Cluster 883 finished in 217.11 seconds. Status: SUCCESS