File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/6effe24420347d4e2f9e56f6519468/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y1tt0iwd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:36:05,966 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:36:06,794 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:36:06,976 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:36:22,692 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:36:22,949 - cnv_pipe.batch.run_model - INFO - Processing cluster 135 with 191 probes
2026-06-02 18:36:23,371 - cnv_pipe.batch.run_model.cluster135 - INFO - Child process started for cluster 135 with 191 probes
2026-06-02 18:39:49,847 - cnv_pipe.batch.run_model.cluster135 - INFO - Child process finished cluster 135. Wrote cluster_135_samples.csv and cluster_135_params.csv
2026-06-02 18:39:49,850 - cnv_pipe.batch.run_model - INFO - Cluster 135 finished in 206.90 seconds. Status: SUCCESS