mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vlkwppa3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:59,016 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:59,814 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:59,982 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:16,115 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:16,413 - cnv_pipe.batch.run_model - INFO - Processing cluster 1005 with 197 probes
2026-06-02 18:39:16,808 - cnv_pipe.batch.run_model.cluster1005 - INFO - Child process started for cluster 1005 with 197 probes
2026-06-02 18:42:49,016 - cnv_pipe.batch.run_model.cluster1005 - INFO - Child process finished cluster 1005. Wrote cluster_1005_samples.csv and cluster_1005_params.csv
2026-06-02 18:42:49,019 - cnv_pipe.batch.run_model - INFO - Cluster 1005 finished in 212.61 seconds. Status: SUCCESS