File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/0622f8ccc876bf7819ec5e134b992a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xm26ad78 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:47,094 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:47,881 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:48,048 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:03,283 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:03,510 - cnv_pipe.batch.run_model - INFO - Processing cluster 1130 with 135 probes
2026-06-02 18:38:03,886 - cnv_pipe.batch.run_model.cluster1130 - INFO - Child process started for cluster 1130 with 135 probes
2026-06-02 18:40:38,786 - cnv_pipe.batch.run_model.cluster1130 - INFO - Child process finished cluster 1130. Wrote cluster_1130_samples.csv and cluster_1130_params.csv
2026-06-02 18:40:38,788 - cnv_pipe.batch.run_model - INFO - Cluster 1130 finished in 155.28 seconds. Status: SUCCESS