File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/1494632b0d2ae72d303bc5ea57c84e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-stt_ua1k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:36:32,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:36:33,071 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:36:33,242 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:36:47,945 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:36:48,143 - cnv_pipe.batch.run_model - INFO - Processing cluster 755 with 190 probes
2026-06-02 18:36:48,514 - cnv_pipe.batch.run_model.cluster755 - INFO - Child process started for cluster 755 with 190 probes
2026-06-02 18:40:12,918 - cnv_pipe.batch.run_model.cluster755 - INFO - Child process finished cluster 755. Wrote cluster_755_samples.csv and cluster_755_params.csv
2026-06-02 18:40:12,922 - cnv_pipe.batch.run_model - INFO - Cluster 755 finished in 204.78 seconds. Status: SUCCESS