File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/e40b497641c962ec8ce3d36b531288/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d_f7xxe4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:13,761 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:14,806 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:15,008 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:33,326 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:33,617 - cnv_pipe.batch.run_model - INFO - Processing cluster 1268 with 194 probes
2026-06-02 18:38:34,120 - cnv_pipe.batch.run_model.cluster1268 - INFO - Child process started for cluster 1268 with 194 probes
2026-06-02 18:43:01,932 - cnv_pipe.batch.run_model.cluster1268 - INFO - Child process finished cluster 1268. Wrote cluster_1268_samples.csv and cluster_1268_params.csv
2026-06-02 18:43:01,934 - cnv_pipe.batch.run_model - INFO - Cluster 1268 finished in 268.32 seconds. Status: SUCCESS