File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/05a258a8233eca26961020cf985037/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gkeub7v5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:58,420 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:59,216 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:59,391 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:39:14,337 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:39:14,554 - cnv_pipe.batch.run_model - INFO - Processing cluster 1154 with 188 probes
2026-06-02 18:39:14,930 - cnv_pipe.batch.run_model.cluster1154 - INFO - Child process started for cluster 1154 with 188 probes
2026-06-02 18:42:40,640 - cnv_pipe.batch.run_model.cluster1154 - INFO - Child process finished cluster 1154. Wrote cluster_1154_samples.csv and cluster_1154_params.csv
2026-06-02 18:42:40,643 - cnv_pipe.batch.run_model - INFO - Cluster 1154 finished in 206.09 seconds. Status: SUCCESS