mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-754q18wj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:40:02,257 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:40:03,165 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:40:03,345 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:40:18,664 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:40:18,751 - cnv_pipe.batch.run_model - INFO - Processing cluster 841 with 140 probes
2026-06-02 18:40:19,314 - cnv_pipe.batch.run_model.cluster841 - INFO - Child process started for cluster 841 with 140 probes
2026-06-02 18:43:07,170 - cnv_pipe.batch.run_model.cluster841 - INFO - Child process finished cluster 841. Wrote cluster_841_samples.csv and cluster_841_params.csv
2026-06-02 18:43:07,173 - cnv_pipe.batch.run_model - INFO - Cluster 841 finished in 168.42 seconds. Status: SUCCESS