File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/91077a5281c7ea7195eb1f63b1fc09/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-64m1ydzw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:02,706 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:03,496 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:03,668 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:19,246 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:19,325 - cnv_pipe.batch.run_model - INFO - Processing cluster 909 with 166 probes
2026-06-02 18:37:19,701 - cnv_pipe.batch.run_model.cluster909 - INFO - Child process started for cluster 909 with 166 probes
2026-06-02 18:40:30,667 - cnv_pipe.batch.run_model.cluster909 - INFO - Child process finished cluster 909. Wrote cluster_909_samples.csv and cluster_909_params.csv
2026-06-02 18:40:30,671 - cnv_pipe.batch.run_model - INFO - Cluster 909 finished in 191.35 seconds. Status: SUCCESS